OncoSeed

This package makes calls to and parses responses from Memorial Sloan Kettering’s OncoTree API (mskcc.oncotree.org).

Installation

library(devtools)  
install_github("meerapatelmd/OncoTree")  

Related Packages

OncoTree maps to both the UMLS Metathesaurus CUI and the NCI Thesaurus Code. Other packages available to crosswalk to the UMLS MTH:

• setupMetathesaurus: instantiate a UMLS MySQL or Postgres database
  • metaoriteSQL: MySQL methods
    
  • metaorite: Postgres methods
    
• CallMeMaybe: R interface with the UMLS API

Code of Conduct

Please note that the OncoSeed project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.